ERT1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YBR239C T388333_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Involved in negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source and positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERT1
M00077_2.00		 Saccharomyces cerevisiae
NYCGGAAY
RTTCCGRN		 PBM
Badis et al.(2008)
YBR239C_2158		 (Direct) (Direct)
ERT1
M01572_2.00		 Saccharomyces cerevisiae
NNCGGARNN
NNYTCCGNN		 PBM
Zhu et al.(2009)
Ybr239c		 (Direct) (Direct)
ERT1
M07504_2.00		 Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0420.1		 (Direct) (Direct)
ERT1
M08646_2.00		 Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH		 Misc
DeBoer et al.(2011)
YBR239C_564		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00077_2.00 Zinc cluster 37 77
M01572_2.00 Zinc cluster 38 78

DNA Binding Domains

Protein ID Domain From To Sequence
YBR239C Zinc cluster 38 78

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action