RDS1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YCR106W T388336_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RDS1
M00078_2.00		 Saccharomyces cerevisiae
GCGGCSGD
HCSGCCGC		 PBM
Badis et al.(2008)
RDS1_2068		 (Direct) (Direct)
RDS1
M01573_2.00		 Saccharomyces cerevisiae
NKCGGVNNNN
NNNNBCCGMN		 PBM
Zhu et al.(2009)
Rds1		 (Direct) (Direct)
RDS1
M07505_2.00		 Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0361.1		 (Direct) (Direct)
RDS1
M08648_2.00		 Saccharomyces cerevisiae
CGGCCGV
BCGGCCG		 Misc
DeBoer et al.(2011)
YCR106W_506		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00078_2.00 Zinc cluster 12 50
M01573_2.00 Zinc cluster 13 51

DNA Binding Domains

Protein ID Domain From To Sequence
YCR106W Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
761_YCR106W Saccharomyces paradoxus 761_YCR106W I 0.622
23122_Multiple Saccharomyces mikatae 23122_Multiple I 0.620
23118_Multiple Saccharomyces mikatae 23118_Multiple I 0.620