CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LYS14
(
Saccharomyces cerevisiae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
YDR034C
T388338_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LYS14
M00080_2.00
Saccharomyces cerevisiae
NNNNGVDWHN
NDWHBCNNNN
PBM
Badis et al.(2008)
LYS14_2065
(Direct)
(Direct)
LYS14
M01574_2.00
Saccharomyces cerevisiae
NNGGRAWNN
NNWTYCCNN
PBM
Zhu et al.(2009)
Lys14
(Direct)
(Direct)
LYS14
M07507_2.00
Saccharomyces cerevisiae
VCGGAATT
AATTCCGB
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0325.1
(Direct)
(Direct)
LYS14
M08651_2.00
Saccharomyces cerevisiae
WWTTCCRVYGGRAWH
DWTYCCRBYGGAAWW
Misc
DeBoer et al.(2011)
YDR034C_133
(Direct)
(Direct)
LYS14
M08652_2.00
Saccharomyces cerevisiae
DNNVHVCGGAATTTNKNNNN
NNNNMNAAATTCCGBDBNNH
Misc
DeBoer et al.(2011)
YDR034C_865
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00080_2.00
Zinc cluster
51
90
NGCSECKRRRMKCDETKPTCWQCARLNRQCVYVLNPKNKK
M01574_2.00
Zinc cluster
157
196
NGCSECKRRRMKCDETKPTCWQCARLNRQCVYVLNPKNKK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YDR034C
Zinc cluster
157
196
NGCSECKRRRMKCDETKPTCWQCARLNRQCVYVLNPKNKK
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces cerevisiae
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
3859_YDR034C
Saccharomyces paradoxus
3859_YDR034C
I
0.683
SKUD_203807
Saccharomyces kudriavzevii
SKUD_203807
I
0.683
SU7_0595
Saccharomyces arboricola
SU7_0595
I
0.683
21342_YDR034C
Saccharomyces bayanus
21342_YDR034C
I
0.654
3344_Multiple
Saccharomyces mikatae
3344_Multiple
I
0.654
ZBAI_06624
Zygosaccharomyces bailii
ZBAI_06624
I
0.582
ZBAI_04585
Zygosaccharomyces bailii
ZBAI_04585
I
0.582
KLLA0_F04213g
Kluyveromyces lactis
KLLA0_F04213g
I
0.582
ZYRO0A03058g
Zygosaccharomyces rouxii
ZYRO0A03058g
I
0.582
KAFR_0E01250
Kazachstania africana
KAFR_0E01250
I
0.574
NDAI_0A05750
Naumovozyma dairenensis
NDAI_0A05750
I
0.574
Kpol_1061p11
Vanderwaltozyma polyspora
Kpol_1061p11
I
0.557
TPHA_0M01040
Tetrapisispora phaffii
TPHA_0M01040
I
0.557
CAGL0K11902g
Candida glabrata
CAGL0K11902g
I
0.549
SAKL0D03586g
Lachancea kluyveri
SAKL0D03586g
I
0.549
TBLA_0I01890
Tetrapisispora blattae
TBLA_0I01890
I
0.549
KNAG_0H01260
Kazachstania naganishii
KNAG_0H01260
I
0.549
Ecym_5131
Eremothecium cymbalariae
Ecym_5131
I
0.549
AACERI_AaceriABL099W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABL099W
I
0.549