CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARO80
(
Saccharomyces cerevisiae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
YDR421W
T388342_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARO80
M01577_2.00
Saccharomyces cerevisiae
NNCGGNDNN
NNHNCCGNN
PBM
Zhu et al.(2009)
Aro80
(Direct)
(Direct)
ARO80
M08656_2.00
Saccharomyces cerevisiae
CGGHHVNBNDCGG
CCGHNVNBDDCCG
Misc
DeBoer et al.(2011)
YDR421W_1509
(Direct)
(Direct)
ARO80
M08657_2.00
Saccharomyces cerevisiae
CGGYWANNNNCGGYWANNNNCGGYWA
TWRCCGNNNNTWRCCGNNNNTWRCCG
Misc
DeBoer et al.(2011)
YDR421W_725
(Direct)
(Direct)
ARO80
M08658_2.00
Saccharomyces cerevisiae
BNNNNNBCTCGGBWABDNNDN
NHNNHVTWVCCGAGVNNNNNV
Misc
DeBoer et al.(2011)
YDR421W_877
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01577_2.00
Zinc cluster
23
67
QACISCRSRKVKCDLGPVDNPHDPPCARCKRELKKCIFSSNKGTS
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YDR421W
Zinc cluster
23
67
QACISCRSRKVKCDLGPVDNPHDPPCARCKRELKKCIFSSNKGTS
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces cerevisiae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
5688_YDR421W
Saccharomyces paradoxus
5688_YDR421W
I
0.641
SKUD_181303
Saccharomyces kudriavzevii
SKUD_181303
I
0.571