RGT1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YKL038W T388357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RGT1
M00092_2.00
Saccharomyces cerevisiae
CGGRDNWWHN

NDWWNHYCCG
PBM
Badis et al.(2008)
RGT1_2131
(Direct) (Direct)
RGT1
M01585_2.00
Saccharomyces cerevisiae
HCGGADNWWN

NWWNHTCCGD
PBM
Zhu et al.(2009)
Rgt1
(Direct) (Direct)
RGT1
M07518_2.00
Saccharomyces cerevisiae
NCGGADNAWHN

NDWTNHTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1
(Direct) (Direct)
RGT1
M08673_2.00
Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN

NNNNDRTTWWTCCGRNNNHN
Misc
DeBoer et al.(2011)
YKL038W_803
(Direct) (Direct)
RGT1
M11480_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RGT1_Q5
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00092_2.00 Zinc cluster 44 85
M01585_2.00 Zinc cluster 45 86

DNA Binding Domains

Protein ID Domain From To Sequence
YKL038W Zinc cluster 45 86

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action