CHA4 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YLR098C T388362_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CHA4
M00095_2.00		 Saccharomyces cerevisiae
NRGCGGRGAN
NTCYCCGCYN		 PBM
Badis et al.(2008)
CHA4_2113		 (Direct) (Direct)
CHA4
M01588_2.00		 Saccharomyces cerevisiae
NNCGGVNNN
NNNBCCGNN		 PBM
Zhu et al.(2009)
Cha4		 (Direct) (Direct)
CHA4
M07521_2.00		 Saccharomyces cerevisiae
RGCGGRGW
WCYCCGCY		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0283.1		 (Direct) (Direct)
CHA4
M08678_2.00		 Saccharomyces cerevisiae
VNNNVVGGCGGARWTNNHVNN
NNBDNNAWYTCCGCCBBNNNB		 Misc
DeBoer et al.(2011)
YLR098C_844		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00095_2.00 Zinc cluster 41 79
M01588_2.00 Zinc cluster 42 80

DNA Binding Domains

Protein ID Domain From To Sequence
YLR098C Zinc cluster 42 80

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
14459_YLR098C Saccharomyces paradoxus 14459_YLR098C I 0.654
16036_YLR098C Saccharomyces bayanus 16036_YLR098C I 0.654
SKUD_176303 Saccharomyces kudriavzevii SKUD_176303 I 0.650
14712_YLR098C Saccharomyces mikatae 14712_YLR098C I 0.577
ZYRO0D06688g Zygosaccharomyces rouxii ZYRO0D06688g I 0.550
KLLA0_F19602g Kluyveromyces lactis KLLA0_F19602g I 0.547
TPHA_0C01080 Tetrapisispora phaffii TPHA_0C01080 I 0.543