ECM22 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YLR228C T388363_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ECM22
M00096_2.00
Saccharomyces cerevisiae
NNCSGRDNHN

NDNHYCSGNN
PBM
Badis et al.(2008)
ECM22_2066
(Direct) (Direct)
ECM22
M00924_2.00
Saccharomyces cerevisiae
NNDWACGRN

NYCGTWHNN
PBM
Gordan et al.(2011)
Ecm22
(Direct) (Direct)
ECM22
M01589_2.00
Saccharomyces cerevisiae
NNNCGGVN

NBCCGNNN
PBM
Zhu et al.(2009)
Ecm22
(Direct) (Direct)
ECM22
M07522_2.00
Saccharomyces cerevisiae
TCCGGAD

HTCCGGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0292.1
(Direct) (Direct)
ECM22
M08679_2.00
Saccharomyces cerevisiae
NNYCGGRNNDMCGGAVNH

DNBTCCGKHNNYCCGRNN
Misc
DeBoer et al.(2011)
YLR228C_849
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
UPC2
M00920_2.00
Saccharomyces cerevisiae
NTCGTWYVN

NBRWACGAN
PBM
Gordan et al.(2011)
Upc2
0.541 0.675
UPC2
M07508_2.00
Saccharomyces cerevisiae
NRWACGA

TCGTWYN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1
0.541 0.675
UPC2
M08654_2.00
Saccharomyces cerevisiae
NRWACGA

TCGTWYN
Misc
DeBoer et al.(2011)
YDR213W_544
0.541 0.675
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00096_2.00 Zinc cluster 41 80
M00924_2.00 Zinc cluster 42 81
M01589_2.00 Zinc cluster 42 81

DNA Binding Domains

Protein ID Domain From To Sequence
YLR228C Zinc cluster 42 81

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
23482_Multiple Saccharomyces mikatae 23482_Multiple I 0.683
15982_YLR228C Saccharomyces paradoxus 15982_YLR228C I 0.683
17002_YLR228C Saccharomyces bayanus 17002_YLR228C I 0.654
KNAG_0A02550 Kazachstania naganishii KNAG_0A02550 I 0.562
KAFR_0H01800 Kazachstania africana KAFR_0H01800 I 0.562
4515_Multiple Saccharomyces bayanus 4515_Multiple I 0.558
SU7_2615 Saccharomyces arboricola SU7_2615 I 0.558
4123_Multiple Saccharomyces mikatae 4123_Multiple I 0.558
NDAI_0C04840 Naumovozyma dairenensis NDAI_0C04840 I 0.551
4533_YDR213W Saccharomyces paradoxus 4533_YDR213W I 0.541
UPC2 Saccharomyces cerevisiae YDR213W D 0.541