CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TEA1
(
Saccharomyces cerevisiae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
YOR337W
T388376_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables DNA binding activity. Involved in transcription elongation from RNA polymerase II promoter. Located in cell cortex of cell tip. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TEA1
M00107_2.00
Saccharomyces cerevisiae
GCGGAVWTW
WAWBTCCGC
PBM
Badis et al.(2008)
TEA1_2096
(Direct)
(Direct)
TEA1
M01596_2.00
Saccharomyces cerevisiae
BCGSNNNWNN
NNWNNNSCGV
PBM
Zhu et al.(2009)
Tea1
(Direct)
(Direct)
TEA1
M07534_2.00
Saccharomyces cerevisiae
GCGSRCWH
DWGYSCGC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0405.1
(Direct)
(Direct)
TEA1
M08693_2.00
Saccharomyces cerevisiae
DWNTKCGGDAWTTAAWHANC
GNTDWTTAAWTHCCGMANWH
Misc
DeBoer et al.(2011)
YOR337W_817
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00107_2.00
Zinc cluster
51
89
LACTNCRNRRKKCDLGFPCGNCSRLELVCNVNDEDLRKK
M01596_2.00
Zinc cluster
68
106
LACTNCRNRRKKCDLGFPCGNCSRLELVCNVNDEDLRKK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YOR337W
Zinc cluster
68
106
LACTNCRNRRKKCDLGFPCGNCSRLELVCNVNDEDLRKK
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces cerevisiae
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SU7_3400
Saccharomyces arboricola
SU7_3400
I
0.683
21533_YOR337W
Saccharomyces paradoxus
21533_YOR337W
I
0.683
20730_YOR337W
Saccharomyces mikatae
20730_YOR337W
I
0.683
SKUD_200506
Saccharomyces kudriavzevii
SKUD_200506
I
0.683
24278_YOR337W
Saccharomyces bayanus
24278_YOR337W
I
0.683
AGOS_ADR365W
Ashbya gossypii
AGOS_ADR365W
I
0.611
NDAI_0E03850
Naumovozyma dairenensis
NDAI_0E03850
I
0.611
AACERI_AaceriADR365W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADR365W
I
0.611
Kpol_1071p10
Vanderwaltozyma polyspora
Kpol_1071p10
I
0.583
ZBAI_06816
Zygosaccharomyces bailii
ZBAI_06816
I
0.557
ZBAI_04921
Zygosaccharomyces bailii
ZBAI_04921
I
0.557
TDEL_0H03950
Torulaspora delbrueckii
TDEL_0H03950
I
0.556
ZYRO0D04422g
Zygosaccharomyces rouxii
ZYRO0D04422g
I
0.540
SAKL0B10538g
Lachancea kluyveri
SAKL0B10538g
I
0.539
LALA0_S14e00452g
Lachancea lanzarotensis
LALA0_S14e00452g
I
0.539