RDS2 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YPL133C T388379_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in cellular response to xenobiotic stimulus; negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source; and positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RDS2
M00109_2.00		 Saccharomyces cerevisiae
NDCGGRNNN
NNNYCCGHN		 PBM
Badis et al.(2008)
RDS2_2062		 (Direct) (Direct)
RDS2
M01598_2.00		 Saccharomyces cerevisiae
NNDCGGRNNN
NNNYCCGHNN		 PBM
Zhu et al.(2009)
Rds2		 (Direct) (Direct)
RDS2
M07536_2.00		 Saccharomyces cerevisiae
VTCGGGG
CCCCGAB		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0362.1		 (Direct) (Direct)
RDS2
M08696_2.00		 Saccharomyces cerevisiae
NCGGMTNAAHGGRN
NYCCDTTNAKCCGN		 Misc
DeBoer et al.(2011)
YPL133C_757		 (Direct) (Direct)
RDS2
M08697_2.00		 Saccharomyces cerevisiae
NNNNNNTCGGRWTTTNNNNNB
VNNNNNAAAWYCCGANNNNNN		 Misc
DeBoer et al.(2011)
YPL133C_822		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00109_2.00 Zinc cluster 14 48
M01598_2.00 Zinc cluster 15 49

DNA Binding Domains

Protein ID Domain From To Sequence
YPL133C Zinc cluster 15 49

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

Invalid Input OrderBy

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action