CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZYRO0C11880g
(
Zygosaccharomyces rouxii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
ZYRO0C11880g
T389280_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
STB5
M00087_2.00
Saccharomyces cerevisiae
NCGGNNHKWN
NWMDNNCCGN
PBM
Badis et al.(2008)
STB5_4529
0.549
0.692
STB5
M00923_2.00
Saccharomyces cerevisiae
NCGGNNNHWN
NWDNNNCCGN
PBM
Gordan et al.(2011)
Stb5
0.549
0.692
STB5
M07514_2.00
Saccharomyces cerevisiae
CGGNVHTA
TADBNCCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0392.1
0.549
0.692
STB5
M08664_2.00
Saccharomyces cerevisiae
CGGNVHKW
WMDBNCCG
Misc
DeBoer et al.(2011)
YHR178W_1405
0.549
0.692
STB5
M08665_2.00
Saccharomyces cerevisiae
BCNGCGGN
NCCGCNGV
Misc
DeBoer et al.(2011)
YHR178W_2068
0.549
0.692
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAR27228
Zinc cluster
13
51
YSCARCRKLKKRCPKESPICNNCQRAGESCVYPGRAPRR
Links
Other
Zinc cluster
family TFs
Other
Zygosaccharomyces rouxii
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LALA0_S07e04368g
Lachancea lanzarotensis
LALA0_S07e04368g
I
0.558
10288_YHR178W
Saccharomyces mikatae
10288_YHR178W
I
0.549
9716_YHR178W
Saccharomyces paradoxus
9716_YHR178W
I
0.549
10973_YHR178W
Saccharomyces bayanus
10973_YHR178W
I
0.549
STB5
Saccharomyces cerevisiae
YHR178W
D
0.549
SKUD_204609
Saccharomyces kudriavzevii
SKUD_204609
I
0.549
SU7_1531
Saccharomyces arboricola
SU7_1531
I
0.549
ZBAI_07720
Zygosaccharomyces bailii
ZBAI_07720
N
0.548
ZBAI_04210
Zygosaccharomyces bailii
ZBAI_04210
N
0.548
TDEL_0G00830
Torulaspora delbrueckii
TDEL_0G00830
N
0.544