CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZYRO0E05676g
(
Zygosaccharomyces rouxii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
ZYRO0E05676g
T389297_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RGT1
M00092_2.00
Saccharomyces cerevisiae
CGGRDNWWHN
NDWWNHYCCG
PBM
Badis et al.(2008)
RGT1_2131
0.592
0.675
RGT1
M01585_2.00
Saccharomyces cerevisiae
HCGGADNWWN
NWWNHTCCGD
PBM
Zhu et al.(2009)
Rgt1
0.592
0.675
RGT1
M07518_2.00
Saccharomyces cerevisiae
NCGGADNAWHN
NDWTNHTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1
0.592
0.675
RGT1
M08673_2.00
Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN
NNNNDRTTWWTCCGRNNNHN
Misc
DeBoer et al.(2011)
YKL038W_803
0.592
0.675
RGT1
M11480_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RGT1_Q5
0.592
0.675
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAR30922
Zinc cluster
66
107
RACDQCRKRKIRCDYDDDKGVCTSCRKNGESCAFERIQLKRG
Links
Other
Zinc cluster
family TFs
Other
Zygosaccharomyces rouxii
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZBAI_03469
Zygosaccharomyces bailii
ZBAI_03469
I
0.612
ZBAI_08469
Zygosaccharomyces bailii
ZBAI_08469
I
0.612
13522_YKL038W
Saccharomyces mikatae
13522_YKL038W
I
0.608
TPHA_0C04280
Tetrapisispora phaffii
TPHA_0C04280
I
0.601
KNAG_0A07100
Kazachstania naganishii
KNAG_0A07100
I
0.600
Kpol_1002p5
Vanderwaltozyma polyspora
Kpol_1002p5
I
0.592
13626_YKL038W
Saccharomyces paradoxus
13626_YKL038W
I
0.592
RGT1
Saccharomyces cerevisiae
YKL038W
D
0.592
SU7_2014
Saccharomyces arboricola
SU7_2014
I
0.591
AACERI_AaceriAGL083W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGL083W
I
0.588
AGOS_AGL083W
Ashbya gossypii
AGOS_AGL083W
I
0.588
KLLA0_F25630g
Kluyveromyces lactis
KLLA0_F25630g
N
0.587
14629_YKL038W
Saccharomyces bayanus
14629_YKL038W
I
0.583
Ecym_7239
Eremothecium cymbalariae
Ecym_7239
I
0.580
TDEL_0B06360
Torulaspora delbrueckii
TDEL_0B06360
I
0.561
PAS_chr1-3_0233
Komagataella pastoris
PAS_chr1-3_0233
I
0.551
XP_002489576.1
Pichia pastoris
XP_002489576.1
I
0.551
SAKL0A09856g
Lachancea kluyveri
SAKL0A09856g
I
0.551
OCS_01338
Ophiocordyceps sinensis
OCS_01338
N
0.548
PGUG_03208
Candida guilliermondii
PGUG_03208
I
0.545
PGUG_03208
Meyerozyma guilliermondii
PGUG_03208
I
0.545
CAGL0L01903g
Candida glabrata
CAGL0L01903g
I
0.542
VHEMI05407
Torrubiella hemipterigena
VHEMI05407
N
0.540