CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.1.1452.1
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gw1.1.1452.1
T389337_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07374
M02623_2.00
Neurospora crassa
NNCGGRNN
NNYCCGNN
PBM
Weirauch et al.(2014)
pTH8973
0.564
0.795
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.1.1452.1
Zinc cluster
30
68
QACETCRNRKQRCDEQRPKCGTCQRFKLDCRYREPQPTK
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FFUJ_00922
Fusarium fujikuroi
FFUJ_00922
I
0.683
NechaG30594
Fusarium solani
NechaG30594
I
0.683
MBM_09947
Marssonina brunnea
MBM_09947
I
0.659
FGRRES_00404
Fusarium graminearum
FGRRES_00404
I
0.654
FPSE_00066
Fusarium pseudograminearum
FPSE_00066
I
0.654
BGHDH14_bgh01862
Blumeria graminis
BGHDH14_bgh01862
I
0.654
OIDMADRAFT_173839
Oidiodendron maius
OIDMADRAFT_173839
I
0.636
OIDMADRAFT_173807
Oidiodendron maius
OIDMADRAFT_173807
I
0.636
OIDMADRAFT_208766
Oidiodendron maius
OIDMADRAFT_208766
I
0.636
VDAG_03199
Verticillium dahliae
VDAG_03199
N
0.621
S40285_00687
Stachybotrys chlorohalonata
S40285_00687
I
0.621
W97_03702
Coniosporium apollinis
W97_03702
I
0.608
estExt_fgenesh3_pm.C_40367
Neurospora discreta
estExt_fgenesh3_pm.C_40367
I
0.582
NEUTE1DRAFT_125788
Neurospora tetrasperma
NEUTE1DRAFT_125788
I
0.582
OIDMADRAFT_173784
Oidiodendron maius
OIDMADRAFT_173784
I
0.582
SMAC_00325
Sordaria macrospora
SMAC_00325
I
0.565
THITE_2112545
Thielavia terrestris
THITE_2112545
I
0.564
NCU07374
Neurospora crassa
NCU07374
D
0.564
MYCTH_2297073
Myceliophthora thermophila
MYCTH_2297073
I
0.564
HMPREF1624_07644
Sporothrix schenckii
HMPREF1624_07644
I
0.557
F503_02770
Ophiostoma piceae uamh
F503_02770
I
0.557
GGTG_01235
Gaeumannomyces graminis
GGTG_01235
I
0.557
SPBR_06814
Sporothrix brasiliensis
SPBR_06814
I
0.557
MGG_00329
Magnaporthe oryzae
MGG_00329
N
0.555
e_gw1.17.45.1
Mycosphaerella fijiensis
e_gw1.17.45.1
N
0.542
gw1.3.136.1
Mycosphaerella graminicola
gw1.3.136.1
N
0.542
Mycgr3G11455
Zymoseptoria tritici
Mycgr3G11455
N
0.542
MYCFIDRAFT_135462
Pseudocercospora fijiensis
MYCFIDRAFT_135462
N
0.542
Z518_04103
Rhinocladiella mackenziei
Z518_04103
N
0.541
PODANS_1_17930
Podospora anserina
PODANS_1_17930
I
0.541
BAUCODRAFT_384024
Baudoinia compniacensis
BAUCODRAFT_384024
I
0.537