CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.3.38.1
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
e_gw1.3.38.1
T389441_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02576
M02597_2.00
Neurospora crassa
NNNCGGVN
NBCCGNNN
PBM
Weirauch et al.(2014)
pTH9668
0.596
0.730
Bcin05g07400
M02571_2.00
Botrytis cinerea
NNNCGGNN
NNCCGNNN
PBM
Weirauch et al.(2014)
pTH8348
0.574
0.811
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.3.38.1
Zinc cluster
52
92
RACEGCRRRKIKCDAATTNAWPCAACIRLKLNCVPPTVSYD
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy