e_gww1.5.1.126.1 (Pichia stipitis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 e_gww1.5.1.126.1 T389550_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEU3
M01590_2.00 		Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN		 PBM
Zhu et al.(2009)
Leu3 		0.552 0.650
LEU3
M07526_2.00 		Saccharomyces cerevisiae
CCKDHDSCGS
SCGSHDHMGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0324.1 		0.552 0.650
LEU3
M08684_2.00 		Saccharomyces cerevisiae
SCKNNNNMGS
SCKNNNNMGS		 Misc
DeBoer et al.(2011)
YLR451W_781 		0.552 0.650
LEU3
M11482_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$LEU3_B 		0.552 0.650
LEU3
M11483_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$LEU3_Q6 		0.552 0.650
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gww1.5.1.126.1 Zinc cluster 48 90

Links

Other Zinc cluster family TFs
Other Pichia stipitis TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PICST_60934 Scheffersomyces stipitis PICST_60934 I 0.683
CPAG_00528 Candida parapsilosis CPAG_00528 I 0.606
CORT_0B02970 Candida orthopsilosis CORT_0B02970 I 0.606
SPAPADRAFT_152650 Spathaspora passalidarum SPAPADRAFT_152650 I 0.606
CANTEDRAFT_103499 Candida tenuis CANTEDRAFT_103499 I 0.603
PAS_chr3_0759 Komagataella pastoris PAS_chr3_0759 N 0.597
XP_002492988.1 Pichia pastoris XP_002492988.1 N 0.597
G210_1528 Candida maltosa G210_1528 I 0.588
CTRG_03202 Candida tropicalis CTRG_03202 I 0.588
HPODL_00249 Ogataea parapolymorpha HPODL_00249 I 0.582
GNLVRS01_PISO0K11296g Millerozyma farinosa GNLVRS01_PISO0K11296g I 0.576
GNLVRS01_PISO0L11297g Millerozyma farinosa GNLVRS01_PISO0L11297g I 0.576
CaO19.4225 Candida albicans CaO19.4225 I 0.575
CaO19.11700 Candida albicans CaO19.11700 I 0.575
BN7_4573 Wickerhamomyces ciferrii BN7_4573 I 0.575
CD36_52000 Candida dubliniensis CD36_52000 I 0.575
LELG_03934 Lodderomyces elongisporus LELG_03934 I 0.575
DEHA2E10120g Debaryomyces hansenii DEHA2E10120g I 0.559
LEU3 Saccharomyces cerevisiae YLR451W D 0.552
ZYRO0D01650g Zygosaccharomyces rouxii ZYRO0D01650g I 0.552
ZBAI_07505 Zygosaccharomyces bailii ZBAI_07505 I 0.552
ZBAI_01033 Zygosaccharomyces bailii ZBAI_01033 I 0.552
KLTH0F18392g Kluyveromyces thermotolerans KLTH0F18392g I 0.552
15147_YLR451W Saccharomyces paradoxus 15147_YLR451W I 0.552
Kwal_21884 Kluyveromyces waltii Kwal_21884 I 0.552
17250_YLR451W Saccharomyces bayanus 17250_YLR451W I 0.552
Scas_Contig691.32 Saccharomyces castellii Scas_Contig691.32 I 0.552
15505_Multiple Saccharomyces mikatae 15505_Multiple I 0.552
NCAS_0H00270 Naumovozyma castellii NCAS_0H00270 I 0.552
Kpol_1008p13 Vanderwaltozyma polyspora Kpol_1008p13 I 0.552
KLTH0F18392g Lachancea thermotolerans KLTH0F18392g I 0.552
Ecym_7203 Eremothecium cymbalariae Ecym_7203 I 0.552
CAGL0H00396g Candida glabrata CAGL0H00396g I 0.552
TPHA_0G00380 Tetrapisispora phaffii TPHA_0G00380 I 0.552
LALA0_S01e18382g Lachancea lanzarotensis LALA0_S01e18382g I 0.552
TDEL_0H00590 Torulaspora delbrueckii TDEL_0H00590 I 0.552
TBLA_0F02920 Tetrapisispora blattae TBLA_0F02920 I 0.552
SU7_2407 Saccharomyces arboricola SU7_2407 I 0.552
NDAI_0D00220 Naumovozyma dairenensis NDAI_0D00220 I 0.552
SAKL0F15444g Lachancea kluyveri SAKL0F15444g I 0.549
KNAG_0D05240 Kazachstania naganishii KNAG_0D05240 I 0.542