CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_10631
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_10631
T389572_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.589
0.889
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_10631
Zinc cluster
574
612
RCQRCRKSKKGCDRQRPCQRCKDAGIGADGCVSEDEGNG
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10009563
Chelonia mydas
Cmyd_10009563
N
0.000
D915_08122
Fasciola hepatica
D915_08122
N
0.000
MCOS_0000566101
Mesocestoides corti
MCOS_0000566101
N
0.000
T265_00242
Opisthorchis viverrini
T265_00242
N
0.000
C_01193
Schistosoma haematobium
C_01193
N
0.000
Sjc_0025520
Schistosoma japonicum
Sjc_0025520
N
0.000
Smp_015670
Schistosoma mansoni
Smp_015670
N
0.000
SMRZ_0001688001
Schistosoma margrebowiei
SMRZ_0001688001
N
0.000
SMTD_0000782201
Schistosoma mattheei
SMTD_0000782201
N
0.000
SROB_0000888801
Schistosoma rodhaini
SROB_0000888801
N
0.000
SMU15000156
Schmidtea mediterranea
SMU15000156
N
0.000
TRE_0001588001
Trichobilharzia regenti
TRE_0001588001
N
0.000