estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 T389675_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU00017
M02582_2.00 		Neurospora crassa
NDCGBNHNNN
NNNDNVCGHN		 PBM
Weirauch et al.(2014)
pTH8351 		0.570 0.711
ANIA_06846
M01390_2.00 		Aspergillus nidulans
VTCGGYTA
TARCCGAB		 PBM
Lambert et al.(2019)
pEX0258 		0.552 0.447
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_sca_18_chr2_1_00122 Zinc cluster 11 48

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action