CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_140356
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1.C_140356
T389805_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
adv-1
M02624_2.00
Neurospora crassa
VGCGSYWMN
NKWRSCGCB
PBM
Weirauch et al.(2014)
pTH9685
0.556
0.872
ANIA_01848
M01400_2.00
Aspergillus nidulans
NVGCGBBWVN
NBWVVCGCBN
PBM
Lambert et al.(2019)
pEX0279
0.553
0.744
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_140356
Zinc cluster
25
63
TGCFTCRLRRKKCDEGKPSCRACKHLGLKCEYKRPMWWS
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy