CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_80993
(
Neurospora discreta
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1.C_80993
T389835_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
qa-1F
M11489_2.00
Neurospora crassa
HHGGNTAADBVYTYAWCCBB
VVGGWTRARBVHTTANCCDD
Transfac
Matys et al.(2006)
F$QA1F_01
0.660
0.949
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_80993
Zinc cluster
60
98
RACDQCRAARERCDGIQPACFPCVSQGRSCTYQASTKKR
Links
Other
Zinc cluster
family TFs
Other
Neurospora discreta
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
qa-1F
Neurospora crassa
NCU06028
D
0.660
SMAC_07407
Sordaria macrospora
SMAC_07407
I
0.660
NEUTE1DRAFT_147986
Neurospora tetrasperma
NEUTE1DRAFT_147986
I
0.660
PODANS_5_5100
Podospora anserina
PODANS_5_5100
I
0.625
MAPG_07478
Magnaporthe poae
MAPG_07478
I
0.620
VDAG_08177
Verticillium dahliae
VDAG_08177
I
0.620
VDBG_08512
Verticillium albo atrum
VDBG_08512
I
0.620
VDBG_08512
Verticillium alfalfae
VDBG_08512
I
0.620
GGTG_00383
Gaeumannomyces graminis
GGTG_00383
I
0.620
GLRG_07125
Colletotrichum graminicola
GLRG_07125
I
0.602
MPH_01982
Macrophomina phaseolina
MPH_01982
I
0.598
UCRNP2_4108
Neofusicoccum parvum
UCRNP2_4108
I
0.598
W97_04550
Coniosporium apollinis
W97_04550
I
0.595
PFICI_15081
Pestalotiopsis fici
PFICI_15081
I
0.594
PVAR5_3766
Byssochlamys spectabilis
PVAR5_3766
I
0.592
fgenesh1_pg.C_scaffold_40000014
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_40000014
I
0.591
MYCFIDRAFT_170117
Pseudocercospora fijiensis
MYCFIDRAFT_170117
I
0.591
F503_06755
Ophiostoma piceae uamh
F503_06755
I
0.585
SPBR_06572
Sporothrix brasiliensis
SPBR_06572
I
0.585
THITE_2116895
Thielavia terrestris
THITE_2116895
I
0.581
MGG_07777
Magnaporthe oryzae
MGG_07777
I
0.578
MYCTH_2067244
Myceliophthora thermophila
MYCTH_2067244
I
0.578
estExt_fgenesh1_pg.C_40955
Cryphonectria parasitica
estExt_fgenesh1_pg.C_40955
I
0.570
SETTUDRAFT_140992
Setosphaeria turcica
SETTUDRAFT_140992
I
0.563
estExt_Genewise1Plus.C_50594
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_50594
I
0.563
PTT_06800
Pyrenophora teres
PTT_06800
I
0.563
COCCADRAFT_5667
Bipolaris zeicola
COCCADRAFT_5667
I
0.563
COCVIDRAFT_27956
Bipolaris victoriae
COCVIDRAFT_27956
I
0.563
LEMA_P062270.1
Leptosphaeria maculans
LEMA_P062270.1
I
0.563
PV06_01512
Exophiala oligosperma
PV06_01512
N
0.549
PV09_01109
Verruconis gallopava
PV09_01109
I
0.548
TRIREDRAFT_65854
Trichoderma reesei
TRIREDRAFT_65854
I
0.547
TRIATDRAFT_238530
Trichoderma atroviride
TRIATDRAFT_238530
I
0.547
X797_007984
Metarhizium robertsii
X797_007984
N
0.546
MAJ_04735
Metarhizium majus
MAJ_04735
N
0.546
MBR_07932
Metarhizium brunneum
MBR_07932
N
0.546
MGU_09278
Metarhizium guizhouense
MGU_09278
N
0.546
MANI_014813
Metarhizium anisopliae
MANI_014813
N
0.546
EURHEDRAFT_497889
Aspergillus ruber
EURHEDRAFT_497889
I
0.545
UV8b_7244
Ustilaginoidea virens
UV8b_7244
N
0.541
SEPMUDRAFT_150184
Sphaerulina musiva
SEPMUDRAFT_150184
I
0.540