CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_90801
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1.C_90801
T389836_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_10600
M01373_2.00
Aspergillus nidulans
YCGGAWAW
WTWTCCGR
PBM
Lambert et al.(2019)
pEX0427
0.548
0.526
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_90801
Zinc cluster
42
79
RACDVCKARKSKCSGGQPCDSCARRRVPCQYEATYTRG
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy