estExt_Genewise1Plus.C_270143 (Cochliobolus heterostrophus C5)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 estExt_Genewise1Plus.C_270143 T389895_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
vad-2
M01420_2.00
Neurospora crassa
NHGWYCGGHNN

NNDCCGRWCDN
PBM
Lambert et al.(2019)
pTH8619
0.552 0.692
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_270143 Zinc cluster 60 101

Links

Other Zinc cluster family TFs
Other Cochliobolus heterostrophus C5 TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA001729 Oryza indica BGIOSGA001729 N 0.000
ONIVA10G08520 Oryza nivara ONIVA10G08520 N 0.000
ONIVA01G16940 Oryza nivara ONIVA01G16940 N 0.000
OMERI10G06110 Oryza meridionalis OMERI10G06110 N 0.000
OMERI01G12940 Oryza meridionalis OMERI01G12940 N 0.000
OGLUM10G09010 Oryza glumaepatula OGLUM10G09010 N 0.000
OGLUM10G08720 Oryza glumaepatula OGLUM10G08720 N 0.000
OGLUM10G08700 Oryza glumaepatula OGLUM10G08700 N 0.000
OBART10G08900 Oryza barthii OBART10G08900 N 0.000
OBART10G08890 Oryza barthii OBART10G08890 N 0.000
OBART01G14190 Oryza barthii OBART01G14190 N 0.000
BGIOSGA031988 Oryza indica BGIOSGA031988 N 0.000
ORGLA10G0075700 Oryza glaberrima ORGLA10G0075700 N 0.000