CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_Genewise1Plus.C_sca_12_chr5_2_00169
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_sca_12_chr5_2_00169
T389955_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_sca_12_chr5_2_00169
Zinc cluster
7
43
TGCITCRIRRVKCDEVKPSCQRCLSSKRRCDGYLPDD
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG68940
Fusarium solani
NechaG68940
N
0.683
PV09_04715
Verruconis gallopava
PV09_04715
N
0.585
VHEMI03040
Torrubiella hemipterigena
VHEMI03040
N
0.574
fgenesh1_pg.sca_31_chr3_5_0000145
Nectria haematococca
fgenesh1_pg.sca_31_chr3_5_0000145
N
0.570
NechaG78454
Fusarium solani
NechaG78454
N
0.570
SAPIO_CDS7129
Scedosporium apiospermum
SAPIO_CDS7129
N
0.569
A1O9_03281
Exophiala aquamarina
A1O9_03281
N
0.564
OIDMADRAFT_74156
Oidiodendron maius
OIDMADRAFT_74156
N
0.564
CCM_05636
Cordyceps militaris
CCM_05636
N
0.563
PV09_00611
Verruconis gallopava
PV09_00611
N
0.563
BBA_00859
Beauveria bassiana
BBA_00859
N
0.563
Z518_07118
Rhinocladiella mackenziei
Z518_07118
N
0.552
CSUB01_04340
Colletotrichum sublineola
CSUB01_04340
N
0.551
Cob_02344
Colletotrichum orbiculare
Cob_02344
N
0.548
CCM_08004
Cordyceps militaris
CCM_08004
N
0.548
PV08_03740
Exophiala spinifera
PV08_03740
N
0.547
CGGC5_13480
Colletotrichum gloeosporioides
CGGC5_13480
N
0.545
CH063_04039
Colletotrichum higginsianum
CH063_04039
N
0.545
TSTA_063990
Talaromyces stipitatus
TSTA_063990
N
0.544
estExt_Genewise1Plus.C_10560
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_10560
N
0.543
MYCFIDRAFT_54726
Pseudocercospora fijiensis
MYCFIDRAFT_54726
N
0.543
Cob_07663
Colletotrichum orbiculare
Cob_07663
N
0.542