CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_genewise1_worm.C_chr_3.10047
(
Pichia stipitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_genewise1_worm.C_chr_3.10047
T389975_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_genewise1_worm.C_chr_3.10047
Zinc cluster
11
49
KVCDFCRRRKVKCDLGNPCSTCVKYGHRNCRYKEQDNEA
Links
Other
Zinc cluster
family TFs
Other
Pichia stipitis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_76670
Scheffersomyces stipitis
PICST_76670
N
0.683
CaO19.5133
Candida albicans
CaO19.5133
N
0.598
CaO19.12598
Candida albicans
CaO19.12598
N
0.598
CD36_72880
Candida dubliniensis
CD36_72880
N
0.596
CTRG_05208
Candida tropicalis
CTRG_05208
N
0.552
CPAG_03428
Candida parapsilosis
CPAG_03428
N
0.548
LELG_05207
Lodderomyces elongisporus
LELG_05207
N
0.548