fgenesh1_pg.sca_82_chr10_2_0000336 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.sca_82_chr10_2_0000336 T390290_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nit-4
M01430_2.00
Neurospora crassa
NTCCGCGGVN

NBCCGCGGAN
PBM
Lambert et al.(2019)
pTH8909
0.586 0.872
nirA
M01350_2.00
Aspergillus nidulans
SYNCGGANNH

DNNTCCGNRS
PBM
Lambert et al.(2019)
pEX0399
0.581 0.872
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_82_chr10_2_0000336 Zinc cluster 42 81

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action