fgenesh1_pm.sca_12_chr5_2_0000158 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pm.sca_12_chr5_2_0000158 T390322_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02307
M02594_2.00 		Neurospora crassa
NCGCGSBHAN
NTDVSCGCGN		 PBM
Weirauch et al.(2014)
pTH7901 		0.612 0.950
NCU02307
M02595_2.00 		Neurospora crassa
NNDAWATTWHNN
NNDWAATWTHNN		 PBM
Weirauch et al.(2014)
pTH8845 		0.612 0.950
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_12_chr5_2_0000158 Zinc cluster 100 139

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action