CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_20_chr6_4_0000197
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_20_chr6_4_0000197
T390338_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_20_chr6_4_0000197
Zinc cluster
43
77
WSCVICRRRKVRCDRRDPCSNCVKNNIECHFPVTG
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG94408
Fusarium solani
NechaG94408
N
0.683
FPSE_00403
Fusarium pseudograminearum
FPSE_00403
N
0.662
FGRRES_02696
Fusarium graminearum
FGRRES_02696
N
0.662
THITE_2027909
Thielavia terrestris
THITE_2027909
N
0.595
TRIATDRAFT_214314
Trichoderma atroviride
TRIATDRAFT_214314
N
0.586
FOXG_10355
Fusarium oxysporum
FOXG_10355
N
0.550
FFUJ_07714
Fusarium fujikuroi
FFUJ_07714
N
0.550
S40285_07465
Stachybotrys chlorohalonata
S40285_07465
N
0.548