CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_2_chr3_3_0000412
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_2_chr3_3_0000412
T390347_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_13344_M
M01417_2.00
Fusarium graminearum
BNGCGGAR
YTCCGCNV
PBM
Lambert et al.(2019)
pTH11414
0.613
0.846
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_2_chr3_3_0000412
Zinc cluster
16
54
KSCAACTKAKRRCDFAVPACLRCSQRCIPCQYPSRTPRG
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy