fgenesh1_pm.sca_82_chr10_2_0000188 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pm.sca_82_chr10_2_0000188 T390361_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
xlr-1
M02621_2.00
Neurospora crassa
NNNNWNNNN

NNNNWNNNN
PBM
Weirauch et al.(2014)
pTH9683
0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_82_chr10_2_0000188 Zinc cluster 93 132

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action