fgenesh1_pm.sca_8_chr1_1_0000149 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pm.sca_8_chr1_1_0000149 T390362_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
vad-5
M02619_2.00 		Neurospora crassa
NNNHCGDNNN
NNNHCGDNNN		 PBM
Weirauch et al.(2014)
pTH8350 		0.683 0.974
vad-5
M02620_2.00 		Neurospora crassa
NNYCGGNWN
NWNCCGRNN		 PBM
Weirauch et al.(2014)
pTH8902 		0.683 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_8_chr1_1_0000149 Zinc cluster 122 161

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action