CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_8_chr1_1_0000186
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_8_chr1_1_0000186
T390363_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_8_chr1_1_0000186
Zinc cluster
12
51
LSCSSCRTRKIKCDKVQPACTQCSRFGLECVYPSRKPTRR
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG89749
Fusarium solani
NechaG89749
N
0.683
FVEG_09595
Fusarium verticillioides
FVEG_09595
N
0.589
FFUJ_01726
Fusarium fujikuroi
FFUJ_01726
N
0.589
FPSE_05018
Fusarium pseudograminearum
FPSE_05018
N
0.589
FOXG_11196
Fusarium oxysporum
FOXG_11196
N
0.589
FGRRES_01515
Fusarium graminearum
FGRRES_01515
N
0.589
S40288_03813
Stachybotrys chartarum
S40288_03813
N
0.557
S40285_04346
Stachybotrys chlorohalonata
S40285_04346
N
0.557