gw1.18.787.1 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 gw1.18.787.1 T390490_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ada-3
M01421_2.00
Neurospora crassa
VCKCGCGA

TCGCGMGB
PBM
Lambert et al.(2019)
pTH8620
0.567 0.684
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.18.787.1 Zinc cluster 1 38

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LPERR01G38080 Leersia perrieri LPERR01G38080 N 0.000
MLOC_81739 Hordeum vulgare MLOC_81739 N 0.000
OB07G17130 Oryza brachyantha OB07G17130 N 0.000
Pavir.Ea04027 Panicum virgatum Pavir.Ea04027 N 0.000
Pavir.Eb03851 Panicum virgatum Pavir.Eb03851 N 0.000
Si004307m.g Setaria italica Si004307m.g N 0.000