CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.27.206.1
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
gw1.27.206.1
T390502_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01678
M01396_2.00
Aspergillus nidulans
NKCGGRDNN
NNHYCCGMN
PBM
Lambert et al.(2019)
pEX0273
0.558
0.553
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.27.206.1
Zinc cluster
25
62
RACDFCKSRKARCTGDLPCAKCVSKGRECSYDAKYTRG
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG12083
Fusarium solani
NechaG12083
I
0.683
TRIATDRAFT_279663
Trichoderma atroviride
TRIATDRAFT_279663
N
0.591
TRIVIDRAFT_124588
Trichoderma virens
TRIVIDRAFT_124588
N
0.591
TRIREDRAFT_71080
Trichoderma reesei
TRIREDRAFT_71080
N
0.588
EURHEDRAFT_451742
Aspergillus ruber
EURHEDRAFT_451742
I
0.573
A1O1_08296
Capronia coronata
A1O1_08296
I
0.571
fgenesh1_pm.00042_#_4
Aspergillus carbonarius
fgenesh1_pm.00042_#_4
I
0.561
ANIA_01678
Aspergillus nidulans
CADANIAG00008319
D
0.558
CCM_05077
Cordyceps militaris
CCM_05077
N
0.557
SEPMUDRAFT_129236
Sphaerulina musiva
SEPMUDRAFT_129236
N
0.551
PFICI_09828
Pestalotiopsis fici
PFICI_09828
I
0.543
Cob_05607
Colletotrichum orbiculare
Cob_05607
I
0.543
GLRG_08945
Colletotrichum graminicola
GLRG_08945
I
0.542
CFIO01_03929
Colletotrichum fioriniae
CFIO01_03929
I
0.542
CGGC5_239
Colletotrichum gloeosporioides
CGGC5_239
I
0.542
CSUB01_07904
Colletotrichum sublineola
CSUB01_07904
I
0.542
MPH_05819
Macrophomina phaseolina
MPH_05819
I
0.540