Scas_Contig590.2 (Saccharomyces castellii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Scas_Contig590.2 T390688_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YLR278C
M00099_2.00
Saccharomyces cerevisiae
NNNCGGVVNN

NNBBCCGNNN
PBM
Badis et al.(2008)
YLR278C_2147
0.539 0.784
YLR278C
M00926_2.00
Saccharomyces cerevisiae
NBCGGAGTTN

NAACTCCGVN
PBM
Gordan et al.(2011)
Ylr278c
0.539 0.784
YLR278C
M07525_2.00
Saccharomyces cerevisiae
NCGGAGWW

WWCTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0430.1
0.539 0.784
YLR278C
M08683_2.00
Saccharomyces cerevisiae
NCGGAGWW

WWCTCCGN
Misc
DeBoer et al.(2011)
YLR278C_589
0.539 0.784
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig590.2 Zinc cluster 39 77

Links

Other Zinc cluster family TFs
Other Saccharomyces castellii TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCAS_0D02960 Naumovozyma castellii NCAS_0D02960 I 0.683
NDAI_0I01940 Naumovozyma dairenensis NDAI_0I01940 I 0.681
16783_Multiple Saccharomyces bayanus 16783_Multiple I 0.539
23508_YLR278C Saccharomyces mikatae 23508_YLR278C I 0.539
YLR278C Saccharomyces cerevisiae YLR278C D 0.539
SU7_2306 Saccharomyces arboricola SU7_2306 I 0.539
15796_YLR278C Saccharomyces paradoxus 15796_YLR278C I 0.539