Scas_Contig720.58 (Saccharomyces castellii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Scas_Contig720.58 T390721_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAL4
M01599_2.00 		Saccharomyces cerevisiae
NYCGGVN
NBCCGRN		 PBM
Zhu et al.(2009)
Gal4 		0.573 0.795
GAL4
M07559_2.00 		Saccharomyces cerevisiae
GGANVRCW
WGYBNTCC		 ChIP-exo
Rhee et al.(2011)
Gal4_1 		0.573 0.795
GAL4
M07560_2.00 		Saccharomyces cerevisiae
GGRAAARGGTC
GACCYTTTYCC		 ChIP-exo
Rhee et al.(2011)
Gal4_2 		0.573 0.795
GAL4
M07561_2.00 		Saccharomyces cerevisiae
AGAACAA
TTGTTCT		 ChIP-exo
Rhee et al.(2011)
Gal4_3 		0.573 0.795
GAL4
M08698_2.00 		Saccharomyces cerevisiae
CGGVSNNVTNYNSNCCG
CGGNSNRNABNNSBCCG		 Misc
DeBoer et al.(2011)
YPL248C_1510 		0.573 0.795
GAL4
M11487_2.00 		Saccharomyces cerevisiae
BYWCGGWSVAVWGHBVBCCGDDV
BHHCGGVBVDCWBTBSWCCGWRV		 Transfac
Matys et al.(2006)
F$GAL4_01 		0.573 0.795
GAL4
M11488_2.00 		Saccharomyces cerevisiae
HKYWCGGHVVRVWGHBNBCCGD
HCGGVNVDCWBYBBDCCGWRMD		 Transfac
Matys et al.(2006)
F$GAL4_C 		0.573 0.795
KLLA0_D12672g
M11472_2.00 		Kluyveromyces lactis
NTMKCGGAWNWYTKYNVTCCGN
NCGGABNRMARWNWTCCGMKAN		 Transfac
Matys et al.(2006)
F$LAC9_C 		0.551 0.590
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig720.58 Zinc cluster 18 56

Links

Other Zinc cluster family TFs
Other Saccharomyces castellii TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0D04190 Naumovozyma castellii NCAS_0D04190 I 0.683
NDAI_0I00740 Naumovozyma dairenensis NDAI_0I00740 I 0.636
24374_YPL248C Saccharomyces bayanus 24374_YPL248C I 0.589
SAKL0A02860g Lachancea kluyveri SAKL0A02860g I 0.575
GAL4 Saccharomyces cerevisiae YPL248C D 0.573
SU7_3455 Saccharomyces arboricola SU7_3455 I 0.573
TBLA_0G01800 Tetrapisispora blattae TBLA_0G01800 I 0.573
21336_YPL248C Saccharomyces mikatae 21336_YPL248C I 0.573
21920_YPL248C Saccharomyces paradoxus 21920_YPL248C I 0.573
KAFR_0F01040 Kazachstania africana KAFR_0F01040 I 0.565
TPHA_0H01980 Tetrapisispora phaffii TPHA_0H01980 I 0.558
Scas_Contig699.7 Saccharomyces castellii Scas_Contig699.7 I 0.558
SKUD_900401 Saccharomyces kudriavzevii SKUD_900401 I 0.558
NCAS_0G01100 Naumovozyma castellii NCAS_0G01100 I 0.558
KUCA_T00003059001 Kuraishia capsulata KUCA_T00003059001 N 0.558
KLLA0_D12672g Kluyveromyces lactis KLLA0_D12672g D 0.551
CANTEDRAFT_103981 Candida tenuis CANTEDRAFT_103981 I 0.550
KNAG_0D00690 Kazachstania naganishii KNAG_0D00690 I 0.540
CANTEDRAFT_110774 Candida tenuis CANTEDRAFT_110774 N 0.538