10288_YHR178W (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 10288_YHR178W T390724_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STB5
M00087_2.00
Saccharomyces cerevisiae
NCGGNNHKWN

NWMDNNCCGN
PBM
Badis et al.(2008)
STB5_4529
0.683 1.000
STB5
M00923_2.00
Saccharomyces cerevisiae
NCGGNNNHWN

NWDNNNCCGN
PBM
Gordan et al.(2011)
Stb5
0.683 1.000
STB5
M07514_2.00
Saccharomyces cerevisiae
CGGNVHTA

TADBNCCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0392.1
0.683 1.000
STB5
M08664_2.00
Saccharomyces cerevisiae
CGGNVHKW

WMDBNCCG
Misc
DeBoer et al.(2011)
YHR178W_1405
0.683 1.000
STB5
M08665_2.00
Saccharomyces cerevisiae
BCNGCGGN

NCCGCNGV
Misc
DeBoer et al.(2011)
YHR178W_2068
0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
10288_YHR178W Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
STB5 Saccharomyces cerevisiae YHR178W D 0.683
LALA0_S07e04368g Lachancea lanzarotensis LALA0_S07e04368g I 0.566
SKUD_204609 Saccharomyces kudriavzevii SKUD_204609 I 0.654
SU7_1531 Saccharomyces arboricola SU7_1531 I 0.653
ZYRO0C11880g Zygosaccharomyces rouxii ZYRO0C11880g I 0.549
10973_YHR178W Saccharomyces bayanus 10973_YHR178W I 0.666
9716_YHR178W Saccharomyces paradoxus 9716_YHR178W I 0.667