CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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11867_YJL089W
(
Saccharomyces mikatae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
11867_YJL089W
T390742_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SIP4
M00089_2.00
Saccharomyces cerevisiae
NNNNNNCSGN
NCSGNNNNNN
PBM
Badis et al.(2008)
SIP4_2067
0.659
0.923
SIP4
M01582_2.00
Saccharomyces cerevisiae
NNNNNNNVVD
HBBNNNNNNN
PBM
Zhu et al.(2009)
Sip4
0.659
0.923
SIP4
M07516_2.00
Saccharomyces cerevisiae
YYCGGRR
YYCCGRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0380.1
0.659
0.923
SIP4
M08669_2.00
Saccharomyces cerevisiae
NCGGNYNVMYSGR
YCSRKBNRNCCGN
Misc
DeBoer et al.(2011)
YJL089W_2067
0.659
0.923
SIP4
M08670_2.00
Saccharomyces cerevisiae
YYCGGRR
YYCCGRR
Misc
DeBoer et al.(2011)
YJL089W_573
0.659
0.923
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
11867_YJL089W
Zinc cluster
44
83
HACDRCRLKKIRCDGLKPNCSNCTKINFPCKTSDKLSRRG
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces mikatae
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy