14172_Multiple (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 14172_Multiple T390759_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YLL054C
M00094_2.00
Saccharomyces cerevisiae
NNCGGVN

NBCCGNN
PBM
Badis et al.(2008)
YLL054C_2046
0.622 0.872
YLL054C
M01587_2.00
Saccharomyces cerevisiae
NNCGGVNNN

NNNBCCGNN
PBM
Zhu et al.(2009)
Yll054c
0.622 0.872
YLL054C
M07520_2.00
Saccharomyces cerevisiae
CGGMSGH

DCSKCCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0429.1
0.622 0.872
YLL054C
M08675_2.00
Saccharomyces cerevisiae
CGGMCGH

DCGKCCG
Misc
DeBoer et al.(2011)
YLL054C_526
0.622 0.872
YLL054C
M08676_2.00
Saccharomyces cerevisiae
TCCGNNNNNNNNNNCGGA

TCCGNNNNNNNNNNCGGA
Misc
DeBoer et al.(2011)
YLL054C_816
0.622 0.872
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
14172_Multiple Zinc cluster 13 51

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
15063_YLL054C Saccharomyces paradoxus 15063_YLL054C I 0.643
YLL054C Saccharomyces cerevisiae YLL054C D 0.622
15411_YLL054C Saccharomyces bayanus 15411_YLL054C I 0.590