15796_YLR278C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 15796_YLR278C T390775_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YLR278C
M00099_2.00
Saccharomyces cerevisiae
NNNCGGVVNN

NNBBCCGNNN
PBM
Badis et al.(2008)
YLR278C_2147
0.683 1.000
YLR278C
M00926_2.00
Saccharomyces cerevisiae
NBCGGAGTTN

NAACTCCGVN
PBM
Gordan et al.(2011)
Ylr278c
0.683 1.000
YLR278C
M07525_2.00
Saccharomyces cerevisiae
NCGGAGWW

WWCTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0430.1
0.683 1.000
YLR278C
M08683_2.00
Saccharomyces cerevisiae
NCGGAGWW

WWCTCCGN
Misc
DeBoer et al.(2011)
YLR278C_589
0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
15796_YLR278C Zinc cluster 39 77

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SU7_2306 Saccharomyces arboricola SU7_2306 I 0.683
23508_YLR278C Saccharomyces mikatae 23508_YLR278C I 0.683
YLR278C Saccharomyces cerevisiae YLR278C D 0.683
16783_Multiple Saccharomyces bayanus 16783_Multiple I 0.683
NCAS_0F00370 Naumovozyma castellii NCAS_0F00370 I 0.645
Scas_Contig526.3 Saccharomyces castellii Scas_Contig526.3 I 0.645
TBLA_0E01110 Tetrapisispora blattae TBLA_0E01110 I 0.643
CAGL0G09757g Candida glabrata CAGL0G09757g I 0.643
KAFR_0A04940 Kazachstania africana KAFR_0A04940 I 0.643
SAKL0A08074g Lachancea kluyveri SAKL0A08074g I 0.640
LALA0_S10e04918g Lachancea lanzarotensis LALA0_S10e04918g I 0.612
KAFR_0G02450 Kazachstania africana KAFR_0G02450 I 0.601
TBLA_0A09760 Tetrapisispora blattae TBLA_0A09760 I 0.601
NDAI_0D02730 Naumovozyma dairenensis NDAI_0D02730 I 0.593
KNAG_0M00970 Kazachstania naganishii KNAG_0M00970 I 0.593
ZYRO0D14432g Zygosaccharomyces rouxii ZYRO0D14432g I 0.575
ZBAI_03663 Zygosaccharomyces bailii ZBAI_03663 I 0.574
ZBAI_09347 Zygosaccharomyces bailii ZBAI_09347 I 0.574
Kpol_345p3 Vanderwaltozyma polyspora Kpol_345p3 I 0.563
TPHA_0K01100 Tetrapisispora phaffii TPHA_0K01100 I 0.561
KLTH0G15180g Kluyveromyces thermotolerans KLTH0G15180g I 0.553
KLTH0G15180g Lachancea thermotolerans KLTH0G15180g I 0.553
TPHA_0F02630 Tetrapisispora phaffii TPHA_0F02630 I 0.548
KNAG_0F03040 Kazachstania naganishii KNAG_0F03040 I 0.546
AGOS_AGR280C Ashbya gossypii AGOS_AGR280C I 0.545
Ecym_3112 Eremothecium cymbalariae Ecym_3112 I 0.545
AACERI_AaceriAGR280C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR280C I 0.545
NDAI_0I01940 Naumovozyma dairenensis NDAI_0I01940 I 0.539
NCAS_0D02960 Naumovozyma castellii NCAS_0D02960 I 0.539
Scas_Contig590.2 Saccharomyces castellii Scas_Contig590.2 I 0.539