15796_YLR278C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 15796_YLR278C T390775_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
YLR278C
M00099_2.00
Saccharomyces cerevisiae
NNNCGGVVNN

NNBBCCGNNN
PBM
Badis et al.(2008)
YLR278C_2147
0.683 1.000
YLR278C
M00926_2.00
Saccharomyces cerevisiae
NBCGGAGTTN

NAACTCCGVN
PBM
Gordan et al.(2011)
Ylr278c
0.683 1.000
YLR278C
M07525_2.00
Saccharomyces cerevisiae
NCGGAGWW

WWCTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0430.1
0.683 1.000
YLR278C
M08683_2.00
Saccharomyces cerevisiae
NCGGAGWW

WWCTCCGN
Misc
DeBoer et al.(2011)
YLR278C_589
0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
15796_YLR278C Zinc cluster 39 77

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action