17002_YLR228C (Saccharomyces bayanus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 17002_YLR228C T390787_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ECM22
M00096_2.00
Saccharomyces cerevisiae
NNCSGRDNHN

NDNHYCSGNN
PBM
Badis et al.(2008)
ECM22_2066
0.654 0.975
ECM22
M00924_2.00
Saccharomyces cerevisiae
NNDWACGRN

NYCGTWHNN
PBM
Gordan et al.(2011)
Ecm22
0.654 0.975
ECM22
M01589_2.00
Saccharomyces cerevisiae
NNNCGGVN

NBCCGNNN
PBM
Zhu et al.(2009)
Ecm22
0.654 0.975
ECM22
M07522_2.00
Saccharomyces cerevisiae
TCCGGAD

HTCCGGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0292.1
0.654 0.975
ECM22
M08679_2.00
Saccharomyces cerevisiae
NNYCGGRNNDMCGGAVNH

DNBTCCGKHNNYCCGRNN
Misc
DeBoer et al.(2011)
YLR228C_849
0.654 0.975
UPC2
M00920_2.00
Saccharomyces cerevisiae
NTCGTWYVN

NBRWACGAN
PBM
Gordan et al.(2011)
Upc2
0.571 0.700
UPC2
M07508_2.00
Saccharomyces cerevisiae
NRWACGA

TCGTWYN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1
0.571 0.700
UPC2
M08654_2.00
Saccharomyces cerevisiae
NRWACGA

TCGTWYN
Misc
DeBoer et al.(2011)
YDR213W_544
0.571 0.700
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
17002_YLR228C Zinc cluster 41 80

Links

Other Zinc cluster family TFs
Other Saccharomyces bayanus TFs

Invalid Input OrderBy

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action