17034_YMR168C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 17034_YMR168C T390788_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CEP3
M00101_2.00 		Saccharomyces cerevisiae
BCTCGGRA
TYCCGAGV		 PBM
Badis et al.(2008)
CEP3_2090 		0.643 0.811
CEP3
M01591_2.00 		Saccharomyces cerevisiae
YTCGGAAA
TTTCCGAR		 PBM
Zhu et al.(2009)
Cep3 		0.643 0.811
CEP3
M07528_2.00 		Saccharomyces cerevisiae
YTCGGAAN
NTTCCGAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0282.1 		0.643 0.811
CEP3
M08687_2.00 		Saccharomyces cerevisiae
YTCGGAAN
NTTCCGAR		 Misc
DeBoer et al.(2011)
YMR168C_524 		0.643 0.811
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
17034_YMR168C Zinc cluster 12 50

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CEP3 Saccharomyces cerevisiae YMR168C D 0.643