17487_YMR280C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 17487_YMR280C T390791_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAT8
M00102_2.00
Saccharomyces cerevisiae
NNNCCGGAN

NTCCGGNNN
PBM
Badis et al.(2008)
CAT8_4532
0.683 1.000
CAT8
M07529_2.00
Saccharomyces cerevisiae
CCGGRN

NYCCGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0280.1
0.683 1.000
CAT8
M08688_2.00
Saccharomyces cerevisiae
NCGGNNNDVNGGNN

NNCCNBHNNNCCGN
Misc
DeBoer et al.(2011)
YMR280C_33
0.683 1.000
CAT8
M11485_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6_01
0.683 1.000
CAT8
M11486_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CAT8_Q6
0.683 1.000
FGRRES_09921
M02577_2.00
Fusarium graminearum
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7794
0.595 0.718
acu-15
M02616_2.00
Neurospora crassa
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH7801
0.595 0.692
acu-15
M02617_2.00
Neurospora crassa
NNCGGVNNNN

NNNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8900
0.595 0.692
ANIA_00689
M11469_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBALL_Q2
0.578 0.667
ANIA_00689
M11470_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCA_Q2
0.578 0.667
ANIA_00689
M11471_2.00
Aspergillus nidulans Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$FACBCB_Q2
0.578 0.667
SIP4
M00089_2.00
Saccharomyces cerevisiae
NNNNNNCSGN

NCSGNNNNNN
PBM
Badis et al.(2008)
SIP4_2067
0.545 0.590
SIP4
M01582_2.00
Saccharomyces cerevisiae
NNNNNNNVVD

HBBNNNNNNN
PBM
Zhu et al.(2009)
Sip4
0.545 0.590
SIP4
M07516_2.00
Saccharomyces cerevisiae
YYCGGRR

YYCCGRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0380.1
0.545 0.590
SIP4
M08669_2.00
Saccharomyces cerevisiae
NCGGNYNVMYSGR

YCSRKBNRNCCGN
Misc
DeBoer et al.(2011)
YJL089W_2067
0.545 0.590
SIP4
M08670_2.00
Saccharomyces cerevisiae
YYCGGRR

YYCCGRR
Misc
DeBoer et al.(2011)
YJL089W_573
0.545 0.590
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
17487_YMR280C Zinc cluster 68 106

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_08129 Aegilops tauschii F775_08129 I 0.000
F775_17094 Aegilops tauschii F775_17094 I 0.000
F775_14949 Aegilops tauschii F775_14949 I 0.000
AMTR_s00003p00219710 Amborella trichopoda AMTR_s00003p00219710 I 0.000
Aquca_002_00135 Aquilegia coerulea Aquca_002_00135 I 0.000
Aquca_003_00440 Aquilegia coerulea Aquca_003_00440 I 0.000
ATMYB21 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000445 I 0.000
MYB108 Arabidopsis lyrata fgenesh2_kg.3__656__AT3G06490.1 I 0.000
MYB78 Arabidopsis lyrata fgenesh2_kg.8__837__AT5G49620.1 I 0.000
AtMYB78 Arabidopsis thaliana AT5G49620 I 0.000
MYB21 Arabidopsis thaliana AT3G27810 I 0.000
MYB108 Arabidopsis thaliana AT3G06490 D 0.000
Bostr.15774s0093 Boechera stricta Bostr.15774s0093 I 0.000
Bostr.0556s0458 Boechera stricta Bostr.0556s0458 I 0.000
Bostr.2570s0008 Boechera stricta Bostr.2570s0008 I 0.000
BRADI1G64140 Brachypodium distachyon BRADI1G64140 I 0.000
BRADI4G09900 Brachypodium distachyon BRADI4G09900 I 0.000
BRADI2G11430 Brachypodium distachyon BRADI2G11430 I 0.000
BRADI4G04627 Brachypodium distachyon BRADI4G04627 I 0.000
BRADI2G38560 Brachypodium distachyon BRADI2G38560 I 0.000
Bo9g008370 Brassica oleracea Bo9g008370 I 0.000
Bo7g085930 Brassica oleracea Bo7g085930 I 0.000
Bo5g143460 Brassica oleracea Bo5g143460 I 0.000
Bo2g151810 Brassica oleracea Bo2g151810 I 0.000
Bo1g147890 Brassica oleracea Bo1g147890 I 0.000
Bo7g092890 Brassica oleracea Bo7g092890 I 0.000
Bra010021 Brassica rapa Bra010021 I 0.000
Bra040274 Brassica rapa Bra040274 I 0.000
Bra039067 Brassica rapa Bra039067 I 0.000
Bra029582 Brassica rapa Bra029582 I 0.000
Bra025300 Brassica rapa Bra025300 I 0.000
Bra020624 Brassica rapa Bra020624 I 0.000
Bra010022 Brassica rapa Bra010022 I 0.000
Bra001202 Brassica rapa Bra001202 I 0.000
PK10896.1 Cannabis sativa PK10896.1 I 0.000
PK21537.1 Cannabis sativa PK21537.1 I 0.000
Cagra.1111s0025 Capsella grandiflora Cagra.1111s0025 I 0.000
Cagra.11216s0001 Capsella grandiflora Cagra.11216s0001 I 0.000
Cagra.3474s0016 Capsella grandiflora Cagra.3474s0016 I 0.000
Cagra.9553s0006 Capsella grandiflora Cagra.9553s0006 I 0.000
Carubv10026871m.g Capsella rubella Carubv10026871m.g I 0.000
Carubv10021411m.g Capsella rubella Carubv10021411m.g I 0.000
Carubv10018700m.g Capsella rubella Carubv10018700m.g I 0.000
Carubv10014195m.g Capsella rubella Carubv10014195m.g I 0.000
evm.TU.supercontig_145.21 Carica papaya evm.TU.supercontig_145.21 I 0.000
evm.TU.contig_30289.2 Carica papaya evm.TU.contig_30289.2 I 0.000
evm.TU.supercontig_49.71 Carica papaya evm.TU.supercontig_49.71 I 0.000
Ca_08069 Cicer arietinum Ca_08069 I 0.000
Ca_03053 Cicer arietinum Ca_03053 I 0.000
Cla015409 Citrullus lanatus Cla015409 I 0.000
Cla008412 Citrullus lanatus Cla008412 I 0.000
Cla019255 Citrullus lanatus Cla019255 I 0.000
Cla022143 Citrullus lanatus Cla022143 I 0.000
Cla017610 Citrullus lanatus Cla017610 I 0.000
Ciclev10005387m.g Citrus clementina Ciclev10005387m.g I 0.000
orange1.1g019911m.g Citrus sinensis orange1.1g019911m.g I 0.000
Cucsa.128620 Cucumis sativus Cucsa.128620 I 0.000
Cucsa.213510 Cucumis sativus Cucsa.213510 I 0.000
Cucsa.252400 Cucumis sativus Cucsa.252400 I 0.000
Cucsa.300720 Cucumis sativus Cucsa.300720 I 0.000
Eucgr.K03562 Eucalyptus grandis Eucgr.K03562 I 0.000
Eucgr.H04082 Eucalyptus grandis Eucgr.H04082 I 0.000
Eucgr.B03985 Eucalyptus grandis Eucgr.B03985 I 0.000
Thhalv10004857m.g Eutrema salsugineum Thhalv10004857m.g I 0.000
Thhalv10004588m.g Eutrema salsugineum Thhalv10004588m.g I 0.000
gene05018-v1.0-hybrid Fragaria vesca gene05018-v1.0-hybrid I 0.000
GLYMA10G01330 Glycine max GLYMA10G01330 I 0.000
GLYMA15G14620 Glycine max GLYMA15G14620 I 0.000
GLYMA19G40650 Glycine max GLYMA19G40650 I 0.000
GLYMA07G36430 Glycine max GLYMA07G36430 I 0.000
GLYMA03G38070 Glycine max GLYMA03G38070 I 0.000
GLYMA19G40670 Glycine max GLYMA19G40670 I 0.000
GLYMA10G01340 Glycine max GLYMA10G01340 I 0.000
GLYMA09G03690 Glycine max GLYMA09G03690 I 0.000
GLYMA17G04171 Glycine max GLYMA17G04171 I 0.000
Gorai.007G121000 Gossypium raimondii Gorai.007G121000 I 0.000
Gorai.006G080800 Gossypium raimondii Gorai.006G080800 I 0.000
Gorai.005G068900 Gossypium raimondii Gorai.005G068900 I 0.000
Gorai.006G265800 Gossypium raimondii Gorai.006G265800 I 0.000
Gorai.011G203900 Gossypium raimondii Gorai.011G203900 I 0.000
Gorai.004G146000 Gossypium raimondii Gorai.004G146000 I 0.000
MLOC_6821 Hordeum vulgare MLOC_6821 I 0.000
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.000
MLOC_68593 Hordeum vulgare MLOC_68593 I 0.000
LPERR03G13320 Leersia perrieri LPERR03G13320 I 0.000
LPERR01G11480 Leersia perrieri LPERR01G11480 I 0.000
LPERR07G23760 Leersia perrieri LPERR07G23760 I 0.000
Lus10017096.g Linum usitatissimum Lus10017096.g I 0.000
Lus10009037.g Linum usitatissimum Lus10009037.g I 0.000
Lus10037818.g Linum usitatissimum Lus10037818.g I 0.000
MDP0000274300 Malus domestica MDP0000274300 I 0.000
MDP0000167107 Malus domestica MDP0000167107 I 0.000
cassava33046.m1 Manihot esculenta cassava33046.m1 I 0.000
cassava39393.m1 Manihot esculenta cassava39393.m1 I 0.000
MTR_4g123040 Medicago truncatula MTR_4g123040 I 0.000
MTR_2g033170 Medicago truncatula MTR_2g033170 I 0.000
MTR_1g086530 Medicago truncatula MTR_1g086530 I 0.000
mgf013798m Mimulus guttatus mgf013798m I 0.000
mgf015990m Mimulus guttatus mgf015990m I 0.000
GSMUA_Achr8G29910_001 Musa acuminata GSMUA_Achr8G29910_001 I 0.000
GSMUA_Achr7G05570_001 Musa acuminata GSMUA_Achr7G05570_001 I 0.000
GSMUA_Achr8G10800_001 Musa acuminata GSMUA_Achr8G10800_001 I 0.000
GSMUA_Achr6G27290_001 Musa acuminata GSMUA_Achr6G27290_001 I 0.000
GSMUA_Achr6G09760_001 Musa acuminata GSMUA_Achr6G09760_001 I 0.000
GSMUA_Achr5G21090_001 Musa acuminata GSMUA_Achr5G21090_001 I 0.000
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I 0.000
GSMUA_Achr3G08370_001 Musa acuminata GSMUA_Achr3G08370_001 I 0.000
GSMUA_Achr1G27270_001 Musa acuminata GSMUA_Achr1G27270_001 I 0.000
GSMUA_Achr9G16640_001 Musa acuminata GSMUA_Achr9G16640_001 I 0.000
GSMUA_Achr1G24960_001 Musa acuminata GSMUA_Achr1G24960_001 I 0.000
GSMUA_Achr11G20830_001 Musa acuminata GSMUA_Achr11G20830_001 I 0.000
GSMUA_Achr11G16130_001 Musa acuminata GSMUA_Achr11G16130_001 I 0.000
GSMUA_Achr11G04930_001 Musa acuminata GSMUA_Achr11G04930_001 I 0.000
GSMUA_AchrUn_randomG00010_001 Musa acuminata GSMUA_AchrUn_randomG00010_001 I 0.000
GSMUA_AchrUn_randomG08600_001 Musa acuminata GSMUA_AchrUn_randomG08600_001 I 0.000
GSMUA_Achr9G07000_001 Musa acuminata GSMUA_Achr9G07000_001 I 0.000
OBART01G12500 Oryza barthii OBART01G12500 I 0.000
OBART07G26990 Oryza barthii OBART07G26990 I 0.000
OB12G22880 Oryza brachyantha OB12G22880 I 0.000
OB11G27320 Oryza brachyantha OB11G27320 I 0.000
OB07G32480 Oryza brachyantha OB07G32480 I 0.000
OB05G12230 Oryza brachyantha OB05G12230 I 0.000
OB05G33720 Oryza brachyantha OB05G33720 I 0.000
OB03G25040 Oryza brachyantha OB03G25040 I 0.000
OB01G22230 Oryza brachyantha OB01G22230 I 0.000
ORGLA03G0145100 Oryza glaberrima ORGLA03G0145100 I 0.000
ORGLA05G0022200 Oryza glaberrima ORGLA05G0022200 I 0.000
ORGLA07G0213800 Oryza glaberrima ORGLA07G0213800 I 0.000
ORGLA01G0104900 Oryza glaberrima ORGLA01G0104900 I 0.000
ORGLA12G0140200 Oryza glaberrima ORGLA12G0140200 I 0.000
OGLUM07G26960 Oryza glumaepatula OGLUM07G26960 I 0.000
OGLUM05G02350 Oryza glumaepatula OGLUM05G02350 I 0.000
OGLUM01G13990 Oryza glumaepatula OGLUM01G13990 I 0.000
BGIOSGA026430 Oryza indica BGIOSGA026430 I 0.000
BGIOSGA035999 Oryza indica BGIOSGA035999 I 0.000
BGIOSGA020382 Oryza indica BGIOSGA020382 I 0.000
BGIOSGA018863 Oryza indica BGIOSGA018863 I 0.000
BGIOSGA010857 Oryza indica BGIOSGA010857 I 0.000
OMERI05G02430 Oryza meridionalis OMERI05G02430 I 0.000
OMERI07G23590 Oryza meridionalis OMERI07G23590 I 0.000
ONIVA05G02220 Oryza nivara ONIVA05G02220 I 0.000
ONIVA07G26740 Oryza nivara ONIVA07G26740 I 0.000
ONIVA01G14890 Oryza nivara ONIVA01G14890 I 0.000
OPUNC05G02190 Oryza punctata OPUNC05G02190 I 0.000
OPUNC01G12250 Oryza punctata OPUNC01G12250 I 0.000
OPUNC07G25360 Oryza punctata OPUNC07G25360 I 0.000
ORUFI07G27930 Oryza rufipogon ORUFI07G27930 I 0.000
ORUFI11G24630 Oryza rufipogon ORUFI11G24630 I 0.000
ORUFI01G13460 Oryza rufipogon ORUFI01G13460 I 0.000
ORUFI12G17730 Oryza rufipogon ORUFI12G17730 I 0.000
ORUFI05G02420 Oryza rufipogon ORUFI05G02420 I 0.000
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I 0.000
OS01G0298400 Oryza sativa OS01G0298400 I 0.000
OS07G0688200 Oryza sativa OS07G0688200 I 0.000
OS01G0128000 Oryza sativa OS01G0128000 I 0.000
MYB2 Oryza sativa OS03G0315400 I 0.000
JAMYB Oryza sativa OS11G0684000 I 0.000
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.000
Pavir.J28445 Panicum virgatum Pavir.J28445 I 0.000
Pavir.Cb00499 Panicum virgatum Pavir.Cb00499 I 0.000
Pavir.Ba00256 Panicum virgatum Pavir.Ba00256 I 0.000
Pavir.Ea00964 Panicum virgatum Pavir.Ea00964 I 0.000
Pavir.Ca00769 Panicum virgatum Pavir.Ca00769 I 0.000
Pavir.Bb03718 Panicum virgatum Pavir.Bb03718 I 0.000
Pavir.J03771 Panicum virgatum Pavir.J03771 I 0.000
Pavir.J39490 Panicum virgatum Pavir.J39490 I 0.000
POPTR_0010s15970 Populus trichocarpa POPTR_0010s15970 I 0.000
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I 0.000
POPTR_0002s19250 Populus trichocarpa POPTR_0002s19250 I 0.000
POPTR_0008s10080 Populus trichocarpa POPTR_0008s10080 I 0.000
POPTR_0014s11230 Populus trichocarpa POPTR_0014s11230 I 0.000
Pm008425 Prunus mume Pm008425 I 0.000
Pm012912 Prunus mume Pm012912 I 0.000
PRUPE_ppa015973mg Prunus persica PRUPE_ppa015973mg I 0.000
PRUPE_ppa025672mg Prunus persica PRUPE_ppa025672mg I 0.000
30076.m004607 Ricinus communis 30076.m004607 I 0.000
SapurV1A.6591s0010 Salix purpurea SapurV1A.6591s0010 I 0.000
SapurV1A.0050s0080 Salix purpurea SapurV1A.0050s0080 I 0.000
SapurV1A.0114s0410 Salix purpurea SapurV1A.0114s0410 I 0.000
Si002446m.g Setaria italica Si002446m.g I 0.000
Si022474m.g Setaria italica Si022474m.g I 0.000
Si030584m.g Setaria italica Si030584m.g I 0.000
Si026574m.g Setaria italica Si026574m.g I 0.000
Si022831m.g Setaria italica Si022831m.g I 0.000
Si035722m.g Setaria italica Si035722m.g I 0.000
Solyc12g099130.1 Solanum lycopersicum Solyc12g099130.1 I 0.000
Solyc01g057910.2 Solanum lycopersicum Solyc01g057910.2 I 0.000
Solyc12g099120.1 Solanum lycopersicum Solyc12g099120.1 I 0.000
Solyc05g053330.2 Solanum lycopersicum Solyc05g053330.2 I 0.000
PGSC0003DMG400027157 Solanum tuberosum PGSC0003DMG400027157 I 0.000
PGSC0003DMG400008761 Solanum tuberosum PGSC0003DMG400008761 I 0.000
PGSC0003DMG401004611 Solanum tuberosum PGSC0003DMG401004611 I 0.000
Sb02g043420 Sorghum bicolor Sb02g043420 I 0.000
Sb09g002680 Sorghum bicolor Sb09g002680 I 0.000
Sb01g037110 Sorghum bicolor Sb01g037110 I 0.000
Sb03g012310 Sorghum bicolor Sb03g012310 I 0.000
Sb05g026820 Sorghum bicolor Sb05g026820 I 0.000
Sb08g018370 Sorghum bicolor Sb08g018370 I 0.000
Sb09g002675 Sorghum bicolor Sb09g002675 I 0.000
TCM_004878 Theobroma cacao TCM_004878 I 0.000
TCM_021433 Theobroma cacao TCM_021433 I 0.000
Traes_1AS_36AF74187 Triticum aestivum Traes_1AS_36AF74187 I 0.000
Traes_4BS_F83CB32DD Triticum aestivum Traes_4BS_F83CB32DD I 0.000
Traes_4AS_E4294BADC Triticum aestivum Traes_4AS_E4294BADC I 0.000
Traes_2DS_61B920833 Triticum aestivum Traes_2DS_61B920833 I 0.000
Traes_2BS_E8D2BD66E Triticum aestivum Traes_2BS_E8D2BD66E I 0.000
Traes_4DL_9023F3504 Triticum aestivum Traes_4DL_9023F3504 I 0.000
Traes_4DS_2A5B4C4C4 Triticum aestivum Traes_4DS_2A5B4C4C4 I 0.000
Traes_5BS_95A52A87F Triticum aestivum Traes_5BS_95A52A87F I 0.000
Traes_5DS_DE2C70E4C Triticum aestivum Traes_5DS_DE2C70E4C I 0.000
Traes_2AS_25C93FD29 Triticum aestivum Traes_2AS_25C93FD29 I 0.000
Traes_2AS_25C93FD291 Triticum aestivum Traes_2AS_25C93FD291 I 0.000
Traes_1AL_91299CB97 Triticum aestivum Traes_1AL_91299CB97 I 0.000
TRIUR3_25116 Triticum urartu TRIUR3_25116 I 0.000
ATMYB2 Vitis vinifera VIT_07s0005g01950 I 0.000
VIT_05s0077g00500 Vitis vinifera VIT_05s0077g00500 I 0.000
GRMZM2G001824 Zea mays GRMZM2G001824 I 0.000
GRMZM2G070849 Zea mays GRMZM2G070849 I 0.000
GRMZM2G131442 Zea mays GRMZM2G131442 I 0.000
GRMZM2G134279 Zea mays GRMZM2G134279 I 0.000
GRMZM2G143046 Zea mays GRMZM2G143046 I 0.000
GRMZM2G158700 Zea mays GRMZM2G158700 I 0.000
GRMZM2G160840 Zea mays GRMZM2G160840 I 0.000
GRMZM2G330475 Zea mays GRMZM2G330475 I 0.000
GRMZM2G425427 Zea mays GRMZM2G425427 I 0.000
GRMZM2G047600 Zea mays GRMZM2G047600 I 0.000