19574_YNR063W (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 19574_YNR063W T390801_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YNR063W
M00103_2.00 		Saccharomyces cerevisiae
NNCGGVNDWN
NWHNBCCGNN		 PBM
Badis et al.(2008)
YNR063W_2118 		0.659 0.947
YNR063W
M01592_2.00 		Saccharomyces cerevisiae
NNCGGNNDWN
NWHNNCCGNN		 PBM
Zhu et al.(2009)
Ynr063w 		0.659 0.947
YNR063W
M07530_2.00 		Saccharomyces cerevisiae
KCGGAGAW
WTCTCCGM		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0432.1 		0.659 0.947
YNR063W
M08689_2.00 		Saccharomyces cerevisiae
NBNNNNTCGGAGAWNNNNNN
NNNNNNWTCTCCGANNNNVN		 Misc
DeBoer et al.(2011)
YNR063W_804 		0.659 0.947
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
19574_YNR063W Zinc cluster 14 53

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
YNR063W Saccharomyces cerevisiae YNR063W D 0.659
SKUD_194308 Saccharomyces kudriavzevii SKUD_194308 I 0.592