21786_YPL133C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 21786_YPL133C T390821_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RDS2
M00109_2.00
Saccharomyces cerevisiae
NDCGGRNNN

NNNYCCGHN
PBM
Badis et al.(2008)
RDS2_2062
0.683 1.000
RDS2
M01598_2.00
Saccharomyces cerevisiae
NNDCGGRNNN

NNNYCCGHNN
PBM
Zhu et al.(2009)
Rds2
0.683 1.000
RDS2
M07536_2.00
Saccharomyces cerevisiae
VTCGGGG

CCCCGAB
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0362.1
0.683 1.000
RDS2
M08696_2.00
Saccharomyces cerevisiae
NCGGMTNAAHGGRN

NYCCDTTNAKCCGN
Misc
DeBoer et al.(2011)
YPL133C_757
0.683 1.000
RDS2
M08697_2.00
Saccharomyces cerevisiae
NNNNNNTCGGRWTTTNNNNNB

VNNNNNAAAWYCCGANNNNNN
Misc
DeBoer et al.(2011)
YPL133C_822
0.683 1.000
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
21786_YPL133C Zinc cluster 15 49

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
22406_YPL133C Saccharomyces paradoxus 22406_YPL133C I 0.683
RDS2 Saccharomyces cerevisiae YPL133C D 0.683
SKUD_201909 Saccharomyces kudriavzevii SKUD_201909 I 0.683
SU7_3530 Saccharomyces arboricola SU7_3530 I 0.659
25392_YPL133C Saccharomyces bayanus 25392_YPL133C I 0.656
TBLA_0C04000 Tetrapisispora blattae TBLA_0C04000 I 0.539