23482_Multiple (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 23482_Multiple T390832_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ECM22
M00096_2.00
Saccharomyces cerevisiae
NNCSGRDNHN

NDNHYCSGNN
PBM
Badis et al.(2008)
ECM22_2066
0.683 1.000
ECM22
M00924_2.00
Saccharomyces cerevisiae
NNDWACGRN

NYCGTWHNN
PBM
Gordan et al.(2011)
Ecm22
0.683 1.000
ECM22
M01589_2.00
Saccharomyces cerevisiae
NNNCGGVN

NBCCGNNN
PBM
Zhu et al.(2009)
Ecm22
0.683 1.000
ECM22
M07522_2.00
Saccharomyces cerevisiae
TCCGGAD

HTCCGGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0292.1
0.683 1.000
ECM22
M08679_2.00
Saccharomyces cerevisiae
NNYCGGRNNDMCGGAVNH

DNBTCCGKHNNYCCGRNN
Misc
DeBoer et al.(2011)
YLR228C_849
0.683 1.000
UPC2
M00920_2.00
Saccharomyces cerevisiae
NTCGTWYVN

NBRWACGAN
PBM
Gordan et al.(2011)
Upc2
0.541 0.675
UPC2
M07508_2.00
Saccharomyces cerevisiae
NRWACGA

TCGTWYN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1
0.541 0.675
UPC2
M08654_2.00
Saccharomyces cerevisiae
NRWACGA

TCGTWYN
Misc
DeBoer et al.(2011)
YDR213W_544
0.541 0.675
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23482_Multiple Zinc cluster 42 81

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
15982_YLR228C Saccharomyces paradoxus 15982_YLR228C I 0.683
ECM22 Saccharomyces cerevisiae YLR228C D 0.683
17002_YLR228C Saccharomyces bayanus 17002_YLR228C I 0.654
KAFR_0H01800 Kazachstania africana KAFR_0H01800 I 0.562
KNAG_0A02550 Kazachstania naganishii KNAG_0A02550 I 0.562
4515_Multiple Saccharomyces bayanus 4515_Multiple I 0.558
4123_Multiple Saccharomyces mikatae 4123_Multiple I 0.558
SU7_2615 Saccharomyces arboricola SU7_2615 I 0.558
NDAI_0C04840 Naumovozyma dairenensis NDAI_0C04840 I 0.551
4533_YDR213W Saccharomyces paradoxus 4533_YDR213W I 0.541
UPC2 Saccharomyces cerevisiae YDR213W D 0.541