24374_YPL248C (Saccharomyces bayanus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 24374_YPL248C T390839_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GAL4
M01599_2.00 		Saccharomyces cerevisiae
NYCGGVN
NBCCGRN		 PBM
Zhu et al.(2009)
Gal4 		0.667 0.949
GAL4
M07559_2.00 		Saccharomyces cerevisiae
GGANVRCW
WGYBNTCC		 ChIP-exo
Rhee et al.(2011)
Gal4_1 		0.667 0.949
GAL4
M07560_2.00 		Saccharomyces cerevisiae
GGRAAARGGTC
GACCYTTTYCC		 ChIP-exo
Rhee et al.(2011)
Gal4_2 		0.667 0.949
GAL4
M07561_2.00 		Saccharomyces cerevisiae
AGAACAA
TTGTTCT		 ChIP-exo
Rhee et al.(2011)
Gal4_3 		0.667 0.949
GAL4
M08698_2.00 		Saccharomyces cerevisiae
CGGVSNNVTNYNSNCCG
CGGNSNRNABNNSBCCG		 Misc
DeBoer et al.(2011)
YPL248C_1510 		0.667 0.949
GAL4
M11487_2.00 		Saccharomyces cerevisiae
BYWCGGWSVAVWGHBVBCCGDDV
BHHCGGVBVDCWBTBSWCCGWRV		 Transfac
Matys et al.(2006)
F$GAL4_01 		0.667 0.949
GAL4
M11488_2.00 		Saccharomyces cerevisiae
HKYWCGGHVVRVWGHBNBCCGD
HCGGVNVDCWBYBBDCCGWRMD		 Transfac
Matys et al.(2006)
F$GAL4_C 		0.667 0.949
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
24374_YPL248C Zinc cluster 9 47

Links

Other Zinc cluster family TFs
Other Saccharomyces bayanus TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
21336_YPL248C Saccharomyces mikatae 21336_YPL248C I 0.667
GAL4 Saccharomyces cerevisiae YPL248C D 0.667
21920_YPL248C Saccharomyces paradoxus 21920_YPL248C I 0.667
SU7_3455 Saccharomyces arboricola SU7_3455 I 0.643
SKUD_900401 Saccharomyces kudriavzevii SKUD_900401 I 0.629
NCAS_0G01100 Naumovozyma castellii NCAS_0G01100 I 0.612
Scas_Contig699.7 Saccharomyces castellii Scas_Contig699.7 I 0.612
KAFR_0F01040 Kazachstania africana KAFR_0F01040 I 0.606
SAKL0A02860g Lachancea kluyveri SAKL0A02860g I 0.605
TBLA_0G01800 Tetrapisispora blattae TBLA_0G01800 I 0.603
Scas_Contig720.58 Saccharomyces castellii Scas_Contig720.58 I 0.589
NCAS_0D04190 Naumovozyma castellii NCAS_0D04190 I 0.589
TPHA_0H01980 Tetrapisispora phaffii TPHA_0H01980 I 0.588
GNLVRS01_PISO0J02671g Millerozyma farinosa GNLVRS01_PISO0J02671g I 0.586
GNLVRS01_PISO0F02711g Millerozyma farinosa GNLVRS01_PISO0F02711g I 0.586
AWRI1499_3090 Brettanomyces bruxellensis AWRI1499_3090 I 0.581
NDAI_0I00740 Naumovozyma dairenensis NDAI_0I00740 I 0.573
ZBAI_06699 Zygosaccharomyces bailii ZBAI_06699 I 0.563
ZBAI_04658 Zygosaccharomyces bailii ZBAI_04658 I 0.563
NDAI_0F01220 Naumovozyma dairenensis NDAI_0F01220 I 0.561
XP_002490850.1 Pichia pastoris XP_002490850.1 I 0.557
CLUG_00203 Clavispora lusitaniae CLUG_00203 I 0.557
DEHA2F03366g Debaryomyces hansenii DEHA2F03366g I 0.557
CLUG_00203 Candida lusitaniae CLUG_00203 I 0.557
PAS_FragB_0075 Komagataella pastoris PAS_FragB_0075 I 0.557
CANTEDRAFT_103981 Candida tenuis CANTEDRAFT_103981 I 0.550
CaO19.5338 Candida albicans CaO19.5338 N 0.549
CaO19.12798 Candida albicans CaO19.12798 N 0.549
CPAG_02485 Candida parapsilosis CPAG_02485 N 0.549
CORT_0C07270 Candida orthopsilosis CORT_0C07270 N 0.549
JL09_g5364 Pichia kudriavzevii JL09_g5364 N 0.549
CD36_24740 Candida dubliniensis CD36_24740 N 0.549
LELG_02329 Lodderomyces elongisporus LELG_02329 N 0.549
G210_5810 Candida maltosa G210_5810 N 0.549
KNAG_0D00690 Kazachstania naganishii KNAG_0D00690 I 0.541