5357_YDR520C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 5357_YDR520C T390861_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
URC2
M00083_2.00 		Saccharomyces cerevisiae
CGGVNWWHNN
NNDWWNBCCG		 PBM
Badis et al.(2008)
YDR520c_2043 		0.668 0.949
URC2
M01578_2.00 		Saccharomyces cerevisiae
NNNNNNNNDN
NHNNNNNNNN		 PBM
Zhu et al.(2009)
Ydr520c 		0.668 0.949
URC2
M07510_2.00 		Saccharomyces cerevisiae
HCGGANWTAN
NTAWNTCCGD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0422.1 		0.668 0.949
URC2
M08659_2.00 		Saccharomyces cerevisiae
HCGGANWTAN
NTAWNTCCGD		 Misc
DeBoer et al.(2011)
YDR520C_553 		0.668 0.949
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
5357_YDR520C Zinc cluster 70 110

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
URC2 Saccharomyces cerevisiae YDR520C D 0.668
5824_YDR520C Saccharomyces bayanus 5824_YDR520C I 0.668
SU7_2814 Saccharomyces arboricola SU7_2814 I 0.665
KAFR_0G01220 Kazachstania africana KAFR_0G01220 I 0.615
TPHA_0E03830 Tetrapisispora phaffii TPHA_0E03830 I 0.579
5481_YDR520C Saccharomyces mikatae 5481_YDR520C I 0.547
Kpol_2002p26 Vanderwaltozyma polyspora Kpol_2002p26 I 0.539