5357_YDR520C (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 5357_YDR520C T390861_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
URC2
M00083_2.00
Saccharomyces cerevisiae
CGGVNWWHNN

NNDWWNBCCG
PBM
Badis et al.(2008)
YDR520c_2043
0.668 0.949
URC2
M01578_2.00
Saccharomyces cerevisiae
NNNNNNNNDN

NHNNNNNNNN
PBM
Zhu et al.(2009)
Ydr520c
0.668 0.949
URC2
M07510_2.00
Saccharomyces cerevisiae
HCGGANWTAN

NTAWNTCCGD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0422.1
0.668 0.949
URC2
M08659_2.00
Saccharomyces cerevisiae
HCGGANWTAN

NTAWNTCCGD
Misc
DeBoer et al.(2011)
YDR520C_553
0.668 0.949
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
5357_YDR520C Zinc cluster 70 110

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
5481_YDR520C Saccharomyces mikatae 5481_YDR520C I 0.547
5824_YDR520C Saccharomyces bayanus 5824_YDR520C I 0.668
KAFR_0G01220 Kazachstania africana KAFR_0G01220 I 0.615
Kpol_2002p26 Vanderwaltozyma polyspora Kpol_2002p26 I 0.539
SU7_2814 Saccharomyces arboricola SU7_2814 I 0.665
TPHA_0E03830 Tetrapisispora phaffii TPHA_0E03830 I 0.579
URC2 Saccharomyces cerevisiae YDR520C D 0.668