5481_YDR520C (Saccharomyces mikatae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 5481_YDR520C T390863_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
URC2
M00083_2.00
Saccharomyces cerevisiae
CGGVNWWHNN

NNDWWNBCCG
PBM
Badis et al.(2008)
YDR520c_2043
0.562 0.900
URC2
M01578_2.00
Saccharomyces cerevisiae
NNNNNNNNDN

NHNNNNNNNN
PBM
Zhu et al.(2009)
Ydr520c
0.562 0.900
URC2
M07510_2.00
Saccharomyces cerevisiae
HCGGANWTAN

NTAWNTCCGD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0422.1
0.562 0.900
URC2
M08659_2.00
Saccharomyces cerevisiae
HCGGANWTAN

NTAWNTCCGD
Misc
DeBoer et al.(2011)
YDR520C_553
0.562 0.900
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
5481_YDR520C Zinc cluster 70 111

Links

Other Zinc cluster family TFs
Other Saccharomyces mikatae TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
5824_YDR520C Saccharomyces bayanus 5824_YDR520C I 0.562
URC2 Saccharomyces cerevisiae YDR520C D 0.562
SU7_2814 Saccharomyces arboricola SU7_2814 I 0.559
5357_YDR520C Saccharomyces paradoxus 5357_YDR520C I 0.547