8420_Multiple (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 8420_Multiple T390881_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PDR1
M00085_2.00 		Saccharomyces cerevisiae
YVCGGAAN
NTTCCGBR		 PBM
Badis et al.(2008)
PDR1_4520 		0.608 0.816
PDR1
M01579_2.00 		Saccharomyces cerevisiae
NNYCGGAAHAN
NTDTTCCGRNN		 PBM
Zhu et al.(2009)
Pdr1 		0.608 0.816
PDR1
M07512_2.00 		Saccharomyces cerevisiae
YCCGCGGV
BCCGCGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0352.1 		0.608 0.816
PDR1
M08661_2.00 		Saccharomyces cerevisiae
YCCGCGGV
BCCGCGGR		 Misc
DeBoer et al.(2011)
YGL013C_485 		0.608 0.816
PDR1
M11476_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$PDR1_Q2_01 		0.608 0.816
PDR1
M11477_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$PDR1_Q2 		0.608 0.816
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
8420_Multiple Zinc cluster 44 81

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PDR1 Saccharomyces cerevisiae YGL013C D 0.608
7655_YGL013C Saccharomyces mikatae 7655_YGL013C I 0.608
8710_YGL013C Saccharomyces bayanus 8710_YGL013C I 0.593