9716_YHR178W (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 9716_YHR178W T390891_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STB5
M00087_2.00
Saccharomyces cerevisiae
NCGGNNHKWN

NWMDNNCCGN
PBM
Badis et al.(2008)
STB5_4529
0.667 0.974
STB5
M00923_2.00
Saccharomyces cerevisiae
NCGGNNNHWN

NWDNNNCCGN
PBM
Gordan et al.(2011)
Stb5
0.667 0.974
STB5
M07514_2.00
Saccharomyces cerevisiae
CGGNVHTA

TADBNCCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0392.1
0.667 0.974
STB5
M08664_2.00
Saccharomyces cerevisiae
CGGNVHKW

WMDBNCCG
Misc
DeBoer et al.(2011)
YHR178W_1405
0.667 0.974
STB5
M08665_2.00
Saccharomyces cerevisiae
BCNGCGGN

NCCGCNGV
Misc
DeBoer et al.(2011)
YHR178W_2068
0.667 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
9716_YHR178W Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

Invalid Input OrderBy

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action